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Yu Chen

5 papers in the library · 79 citations · publishing 2020-2025

Papers

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OpenMMDL - Simplifying the Complex: Building, Simulating, and Analyzing Protein-Ligand Systems in OpenMM.

Journal of chemical information and modeling February 24, 2025 Valerij Talagayev, Yu Chen, Niklas Piet Doering et al. 16 citations

Molecular dynamics (MD) simulations have become an essential tool for studying the dynamics of biological systems and exploring protein-ligand interactions. OpenMM is a modern, open-source software toolkit designed for MD simulations. Until now, it has lacked a module dedicated to building receptor-ligand systems, which is highly useful for investigating protein-ligand interactions for drug...

DOI: 10.1021/acs.jcim.4c02158 (opens in new tab) Full text (opens in new tab) Molecular-simulation Pharmaceutical-research Drug-discovery Bioinformatics

Perioperative Adjunctive Esketamine for Postpartum Depression Among Women Undergoing Elective Cesarean Delivery

JAMA Network Open March 6, 2024 Yu Chen, Yu Guo, Han Wu et al. 63 citations

Importance Postpartum depression (PPD) is one of the most common mental health conditions during the perinatal and postpartum periods, which can have adverse effects on both mother and infant. Objective To investigate the efficacy of perioperative adjunctive esketamine administration after cesarean deliveries in the prevention of PPD. Design, Setting, and Participants A single-center,...

DOI: 10.1001/jamanetworkopen.2024.0953 (opens in new tab) Full text (opens in new tab) Postpartum-depression Cesarean-section Mental-health Maternal-health +1

Effects of MBSR therapy on negative emotions, fatigue, and sleep quality in “post-ICU patients”

Medicine January 7, 2022 Yu Chen, Renying Wang, Jie Yu et al.

Abstract Background: Survivors of intensive care unit (ICU) transfer to the common ward are often accompanied by psychological distress, negative emotions, fatigue, and sleep disturbances that affect recovery. Mindfulness-based stress reduction (MBSR) has achieved reliable results in improving physical and mental health. However, no clinical study has been conducted to evaluate the effects of...

High ambient temperature increases the toxicity and lethality of 3,4-methylenedioxymethamphetamine and methcathinone.

Pharmacology, Biochemistry, and Behavior May 2020 Yu Chen, Huyen T N Tran, Yasir H Saber et al.

Methylenedioxymethamphetamine (MDMA) and methcathinone (MCAT) are abused psychostimulant drugs that produce adverse effects in human users that include hepatotoxicity and death. Recent work has suggested a connection between hepatotoxicity, elevations in plasma ammonia, and brain glutamate function for methamphetamine (METH)-induced neurotoxicity. These experiments investigated the effect of...

The effect of brief and focused mindfulness meditation on young adults using EEG approach with machine learning

Yongxin Luo, Yaoyao Zhang, Yuqing Zhai et al. preprint

Abstract Our study seeks to investigate the neural mechanisms underlying brief mindfulness meditation through the utilization of electroencephalogram (EEG) recordings and machine learning techniques. Twenty-four participants underwent mindfulness training, with pre- and post-practice physiological assessments and EEG recordings. Deep learning was used to analyze EEG data to predict mindfulness...