A whole genome atlas of 81 Psilocybe genomes as a resource for psilocybin production.
Kevin Mckernan, Liam T. Kane, Yvonne Helbert, Lei Zhang, Nathan Houde, Stephen Mclaughlin
F1000Research September 23, 2021 DOI: 10.12688/f1000research.55301.1 (opens in new tab)
Study at a glance
AI-extracted from the abstract| Characteristics | Comparative genomic study Peer reviewed |
|---|---|
| Sample size | 81 |
| Population | Psilocybe genomes |
| Topics | Psilocybin |
| Keywords | Genome Computational biology Genetics |
| Citations | 10 |
| Key points | Three Psilocybe species lack the known psilocybin synthesis gene cassette but show homology to an alternative pathway, suggesting convergent evolution. |
Abstract
The Psilocybe genus is well known for the synthesis of valuable psychoactive compounds such as Psilocybin, Psilocin, Baeocystin and Aeruginascin. The ubiquity of Psilocybin synthesis in Psilocybe has been attributed to a horizontal gene transfer mechanism of a ~20Kb gene cassette. A recently published highly contiguous reference genome derived from long read single molecule sequencing has underscored interesting variation in this Psilocybin synthesis gene cassette. This reference genome has also enabled the shotgun sequencing of spores from many Psilocybe strains to better catalog the genomic diversity in the Psilocybin synthesis pathway. Here we present the de novo assembly of genomes of 81 Psilocybe genomes compared to the P.envy reference genome. Surprisingly, the genomes of Psilocybe galindoi , Psilocybe tampanensis and Psilocybe azurescens lack sequence coverage over the previously described Psilocybin synthesis pathway but do demonstrate amino acid sequence homology to an alternative pathway and may illuminate previously proposed convergent evolution of Psilocybin synthesis.
Citations in the library
Cited by 8
- Diversity, biology, and history of psilocybin-containing fungi: Suggestions for research and technological development. Fungal biology April 1, 2022
- A journey with psychedelic mushrooms: From historical relevance to biology, cultivation, medicinal uses, biotechnology, and beyond Biotechnology Advances August 31, 2023
- Phylogenomics of the psychoactive mushroom genus Psilocybe and evolution of the psilocybin biosynthetic gene cluster Proceedings of the National Academy of Sciences January 9, 2024
- Psilocybin containing mushrooms: a rapidly developing biotechnology industry in the psychiatry, biomedical and nutraceutical fields. 3 Biotech December 1, 2022
- A „Magic Mushroom“ Multi‐Product Sesquiterpene Synthase ChemBioChem August 24, 2023
and 3 more in the library
Cites 8
- Psilocybin produces substantial and sustained decreases in depression and anxiety in patients with life-threatening cancer: A randomized double-blind trial Journal of Psychopharmacology November 30, 2016
- Rapid and sustained symptom reduction following psilocybin treatment for anxiety and depression in patients with life-threatening cancer: a randomized controlled trial Journal of Psychopharmacology November 30, 2016
- Trial of Psilocybin versus Escitalopram for Depression New England Journal of Medicine April 14, 2021
- Effects of Psilocybin-Assisted Therapy on Major Depressive Disorder JAMA Psychiatry November 4, 2020
- Enzymatic Synthesis of Psilocybin Angewandte Chemie International Edition August 1, 2017
and 3 more in the library