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5-HT2 Receptor Subfamily and the Halogen Bond Promise

A. Fierro, Douglas J. Matthies, B. Cassels, P. Jaque, G. Zapata-Torres

Journal of chemical information and modeling October 7, 2021 DOI: 10.1021/acs.jcim.1c00466 (opens in new tab)

Study at a glance

AI-extracted from the abstract
Characteristics Computational study (molecular docking and molecular dynamics simulations) Peer reviewed
Topics Serotonin
Key points The authors propose that halogen bonds between C-4 halogens on DOX compounds and backbone carbonyl oxygens contribute to the up-to-two-orders-of-magnitude higher affinity of Cl, Br, and I analogs over the hydrogen analog at all three 5-HT2 receptor subtypes. Binding affinity increases with halogen polarizability (I ≈ Br > Cl > F), and the response is similar for 5-HT2A and 5-HT2C but weaker for 5-HT2B.

Abstract

The binding of C-4-halogenated 1-(4-X-2,5-dimethoxyphenyl)-2-aminopropane (DOX) serotonin agonist psychedelics at all three 5-HT2 receptor subtypes is up to two orders of magnitude stronger for X = Cl, Br, or I (but not F) than when C-4 bears a hydrogen atom and more than expected from their hydrophobicities. Our docking and molecular dynamics simulations agree with the fact that increasing the polarizability of halogens results in halogen-oxygen distances to specific backbone C═O groups, and C-X···O angles, in ranges expected for halogen bonds (XBs), which could contribute to the high affinities observed. Good linear correlations are found for each receptor type, indicating that the binding pocket-ligand affinity is enhanced as the XB interaction becomes stronger (i.e., I ≈ Br > Cl > F). It is also striking to note how the linear equations unveil that the receptor's response on the strength of the XB interaction is quite similar among 5-HT2A and 5-HT2C, whereas the 5-HT2B's sensitivity is less. The calculated dipole polarizabilities in the binding pocket of the receptors reflect the experimental affinity values, indicating that less-polarizable and harder binding sites are more prone to XB formation.

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