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De novo sequencing and analysis of Lophophora williamsii transcriptome, and searching for putative genes involved in mescaline biosynthesis

Enrique Ibarra‐laclette, Flor Zamudio Hernández, Claudia Pérez-torres, Victor A. Albert, Enrique Ramı́rez-chávez, Jorge Molina‐torres, Araceli Fernández-cortés, Carlos Calderón‐vázquez, José Luís Olivares-Romero, Alfredo Herrera‐estrella, Luís Herrera‐estrella

BMC Genomics September 1, 2015 DOI: 10.1186/s12864-015-1821-9 (opens in new tab)

Study at a glance

AI-extracted from the abstract
Characteristics Transcriptome sequencing analysis Peer reviewed
Population Lophophora williamsii
Topics Mescaline
Keywords Kegg Transcriptome Sequence assembly Genetics Pyrosequencing Genome Computational biology Botany
Citations 26
Key points Candidate genes including tyrosine/DOPA decarboxylase, hydroxylases, and O-methyltransferases were identified as potentially involved in mescaline biosynthesis.

Abstract

High throughput transcriptome sequencing (RNA-seq) analysis allowed us to efficiently identify candidate genes involved in mescaline biosynthetic pathway in L. williamsii; these included tyrosine/DOPA decarboxylase, hydroxylases, and O-methyltransferases. This study sets the theoretical foundation for bioassay design directed at confirming the participation of these genes in mescaline production.

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